From e84c90c9b6af69c0590c8a1aff38c4f3678039ce Mon Sep 17 00:00:00 2001 From: nicolas-zimmermann Date: Thu, 24 Oct 2019 15:32:45 +0200 Subject: [PATCH] added final response --- wgs.sh | 2 ++ 1 file changed, 2 insertions(+) diff --git a/wgs.sh b/wgs.sh index 67b588c..6e86ad3 100644 --- a/wgs.sh +++ b/wgs.sh @@ -37,3 +37,5 @@ sed "s:>:*\n>:g" results/genes.fna | sed -n "/partial=00/,/*/p"|grep -v "*" > re # Question 6 blastn -query results/genes_full.fna -db databases/resfinder.fna -perc_identity 0.8 -qcov_hsp_perc 0.8 -evalue 1e-3 -outfmt 6 -out results/annoted_genes.dat + +# Les génomes présentent de nombreux gènes de résistances à des antibiotiques : catB7, floR, tet(A)....