nzimmermann
/
projet_court_nz
1
0
Fork 0
Code Releases Activity

corrected README content

master
Nicolas Zimmermann 2019-09-18 23:38:07 +02:00
parent c2f35aba77
commit c62a73ff57
1 changed files with 6 additions and 3 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

9
README
View File

@ -3,15 +3,18 @@ Make sure your current directory is projet_court_nz
Environment
1 - Recreate the conda environment with the config_projet.yml file avaible in the src repository
$ conda env create -f src/config_projet.yml
$ conda env create -f src/environment.yml
2 - Activate the generated environment
$ conda activate projet-court
toy-example:
md.pdb contains structural information of 501 conformations of the calf-1 domain
3 - try the program on md.pdb
$ python3 src/projet8 data/md.pdb
3 - try the program by parsing the md.pdb sequences into 4 cluster
$ python3 src/projet8.py data/md.pdb 4
$ python3 src/projet8.py [.pdbfile] [number of desired clusters]
Results are generated in the results folder
Informations: