Before clean comments

vcf_to_sfs.py

@@ -82,16 +82,16 @@ with gzip.open(sys.argv[1], "rb") as inputgz:
             if folded :
                 #allele_counts_list = list(allele_counts.keys())
                 ##print("ALC", allele_counts_list, "POLY", polyallelic, ALT)
-                # for al in range(polyallelic-1):
-                #     SFS_values[min(allele_counts_list)-1] += 1/len(ALT)
-                #     allele_counts_list.remove(min(allele_counts_list))
-                if len(ALT) == 1:
-                    SFS_values[min(allele_counts_list)-1] += 1
-                else:
-                    for al in range(polyallelic-1):
-                        SFS_values[min(allele_counts_list)-1] += 1/len(ALT)
-                        allele_counts_list.remove(min(allele_counts_list))
-                        polycount += 1
+                for al in range(polyallelic-1):
+                    SFS_values[min(allele_counts_list)-1] += 1/len(ALT)
+                    allele_counts_list.remove(min(allele_counts_list))
+                # if len(ALT) == 1:
+                #     SFS_values[min(allele_counts_list)-1] += 1
+                # else:
+                #     for al in range(polyallelic-1):
+                #         SFS_values[min(allele_counts_list)-1] += 1/len(ALT)
+                #         allele_counts_list.remove(min(allele_counts_list))
+                #         polycount += 1
         line = inputgz.readline()
         print(SFS_values)
 print(polycount)