Browse Source

Final commit for evaluation with report under /doc folder

Thomas Forest 4 years ago
parent
commit
d82c83a75d
4 changed files with 1584 additions and 6 deletions
  1. 4 0
      README.md
  2. 1580 0
      data/1bta.pdb
  3. BIN
      doc/rapport_implementation_FOREST_Thomas.pdf
  4. 0 6
      src/geometry.py

+ 4 - 0
README.md View File

@@ -6,11 +6,15 @@ Attempt to implement the historic 1983 version of DSSP (Define Secondary Structu
6 6
 
7 7
 These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.
8 8
 
9
+Note that a 1est.dssp file is present. It is a real output from the original DSSP program, used for comparison.
10
+
9 11
 ### Prerequisites
10 12
 
11 13
 You need to have **Python 3** and **Conda** on your machine, as it will be used to deploy the running environnement of DSSP.
12 14
 This program has been tested for Python 3.7.4.
13 15
 
16
+This program only use standard Python lib, according to the batteries included principle, except for the PyMOL experimental lib, gotten from the schrodinger channel in Conda cloud forge.
17
+
14 18
 ### Installing
15 19
 
16 20
 Use conda to create the environment

File diff suppressed because it is too large
+ 1580 - 0
data/1bta.pdb


BIN
doc/rapport_implementation_FOREST_Thomas.pdf View File


+ 0 - 6
src/geometry.py View File

@@ -1,6 +0,0 @@
1
-class GeomObject:
2
-
3
-    pass
4
-
5
-class Distance:
6
-    pass