Make sure your current directory is projet_court_nz<br><br>Environment<br><br>1 - Recreate the conda environment with the config_projet.yml file avaible in the src repository <br>	$ conda env create -f src/environment.yml<br>2 - Activate the generated environment<br>	$ conda activate projet-court<br><br>toy-example:<br>md.pdb contains structural information of 501 conformations of the calf-1 domain<br><br>3 - try the program by parsing the md.pdb sequences into 4 cluster<br>	$ python3 src/projet8.py data/md.pdb 4<br>	$ python3 src/projet8.py [.pdbfile] [number of desired clusters]<br><br>Results are generated in the results folder <br><br>Informations:<br><br>The pdb was obtained from .trr and .gro files available online (http://www.dsimb.inserm.fr/~tmp/DM_Calf-1_WT_production_long1.tar.gz)<br>pbd was generated using gromacs :<br>	$ trjconv -f md.trr -s md -o md.pdb<br>