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  • 33a120ed7e version utilisée pour la thèse / PCIA master richard 2026-08-25 10:26:30 +0200
  • 1848102140 Fixing some scaling for swp2 output tforest 2024-02-29 00:59:25 +0100
  • 25d7ef0858 Improving sfs plotting tforest 2024-02-29 00:59:09 +0100
  • 14538a747b Add some outputs for swp2 parsing tforest 2024-02-26 18:55:05 +0100
  • 7949befb40 Adjust xlim and ylims for swp2 tforest 2024-02-25 21:38:38 +0100
  • 658693c2a2 Fixing some plotting issues for swp2 tforest 2024-02-25 17:47:44 +0100
  • 541d1d7348 Fixing the sorting of best scenarios for swp2 parsing tforest 2024-02-25 03:53:32 +0100
  • 0ffb02e511 Some tweaking of axis limits tforest 2024-02-25 03:32:01 +0100
  • 03ea6f938b Improve plotting with concordant colours tforest 2024-02-25 02:10:31 +0100
  • 4aedf5e280 Improve plotting with swp2 control curve tforest 2024-02-25 00:27:26 +0100
  • 8c8545a9ff Previous plotting system before feb version tforest 2024-02-21 22:12:53 +0100
  • 44449033db Update SFS plotting function tforest 2024-02-21 22:11:24 +0100
  • fed1a36d79 Get rid of the old plot_all_epochs_theta tforest 2023-12-19 02:10:13 +0100
  • f90938f8d9 Save all epochs in JSON tforest 2023-12-19 01:37:00 +0100
  • 6a6d4bf6f9 Remove unused functions for swp2 tforest 2023-12-08 22:09:53 +0100
  • 89813468b5 First version of the new layout of combined plots tforest 2023-12-07 17:35:39 +0100
  • eb2799bc98 Fixing proportion labels tforest 2023-12-07 02:22:08 +0100
  • 66d399d6f0 Keeping only thetas with the lowest logLik for breakpoints thetas tforest 2023-12-06 22:30:48 +0100
  • 6287f2aa71 Fixing plot font size issues tforest 2023-12-05 17:04:36 +0100
  • 2e4aca9951 Update on swp2 plots tforest 2023-12-01 17:08:13 +0100
  • 3f174048f1 Grid of plots for swp2 thetas tforest 2023-12-01 10:42:58 +0100
  • 43f689e764 Some progress on subplots tforest 2023-12-01 00:48:57 +0100
  • 46a2990a2d Adjust x-axis ticks for large SFSs tforest 2023-11-30 22:07:45 +0100
  • 87bef76e28 Compute proportion of information used for theta plots tforest 2023-11-29 16:03:15 +0100
  • 23fef174f2 Ok likelihood swp2 tforest 2023-11-29 15:29:12 +0100
  • 2253ce5f67 theoritical logLn swp2 tforest 2023-11-28 19:36:49 +0100
  • 463b9e63f9 New plots for swp2 output files tforest 2023-11-27 13:49:25 +0100
  • f79d48bf5b Rectify swp2 plot tforest 2023-11-17 17:12:27 +0100
  • bbc06411e9 swp2 plotting improve tforest 2023-11-10 10:28:43 +0100
  • ecc6fd23fc sfs plotting tforest 2023-11-10 10:28:31 +0100
  • 592b16e7f3 Swp2 plot but reversed tforest 2023-08-09 11:31:44 +0200
  • 20d66bf1cc Modify the sfs plot tforest 2023-07-13 15:29:27 +0200
  • 2b5dc75f30 swp2 plot add tforest 2023-07-13 15:29:00 +0200
  • f3fc152df3 correction of transformed sfs plot tforest 2023-07-12 16:03:18 +0200
  • a92dba2d25 correction for sfs transform plot tforest 2022-07-08 14:15:41 +0200
  • a8b5c1aa6f update the sfs_barplot auto title tforest 2022-05-25 17:00:20 +0200
  • ec972a7cdf update sfs plot and vcf parsing tforest 2022-05-23 20:25:12 +0200
  • 856e20d46e improve gestion of already parsed vcf for other functions tforest 2022-02-17 16:38:09 +0100
  • a7e78958b2 update output plotting of chrom continuity tforest 2022-02-16 15:42:34 +0100
  • 8d4d36a1f9 better gestion of memory while parsing vcf tforest 2022-02-15 18:02:06 +0100
  • a439f0cef6 add stats sfs tforest 2022-02-14 17:01:12 +0100
  • 0425fcfa03 fix karyotype plot tforest 2022-02-14 16:25:35 +0100
  • 017bf2c4ed corr. vcf_to_sfs tforest 2022-02-14 10:32:11 +0100
  • 257c713458 update plot lib form multiple chrom coverage tforest 2022-02-14 10:20:04 +0100
  • 7a08bb7b41 add scripts for vcf tools tforest 2022-02-09 15:13:41 +0100
  • 91915e5fa8 Modifs script C tforest 2021-11-18 11:14:50 +0100
  • 86f84a676d Add C version start tforest 2021-10-29 16:19:26 +0200
  • 6799dd9a53 Cleaned tforest 2021-10-25 11:24:27 +0200
  • 77991f07ad Before clean comments tforest 2021-10-25 11:23:08 +0200
  • c1e2cc9192 add polyallelic snps tforest 2021-10-22 11:31:06 +0200
  • 110ba26f7e add comments tforest 2021-10-19 11:32:30 +0200
  • a7490aed15 rectify sfs comp tforest 2021-10-19 10:43:58 +0200
  • 0e25049a58 folded version tforest 2021-10-18 17:11:51 +0200
  • 598fb21351 first commit tforest 2021-10-18 16:17:38 +0200